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USDA-ARS, Animal and Natural Resources Institute, Animal Waste Pathogens Lab., Bldg. 173, BARC-East, 10300 Baltimore Ave, Beltsville, MD 20705-2350
* Corresponding author (aguber{at}anri.barc.usda.gov)
1 Manufacturer names are given for information only, and do not constitute endorsement by the USDA. ![]()
Received 24 June 2004.
| ABSTRACT |
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Abbreviations: BTCs, breakthrough curves CBTC, cumulative breakthrough curve CFUs, colony forming units EC, electrical conductivity NTU, nephelometric turbidity units
| INTRODUCTION |
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Although soil can mitigate bacterial movement or leaching, some bacteria applied onto soil or released within soil may still be transported through and travel in the vadose zone to groundwater. Much literature documents bacterial transport from a few meters to 830 m depending on soil or sediment texture and permeability, water saturation degree, and length of time. Stoddard et al. (1998) showed that fecal bacteria were transported to a depth of 90 cm in silt loam soil by the first rain after application of dairy manure, when <2 cm of rain had fallen during a single event. Rainfall or irrigation at intensity of 1 cm h1 appeared to be sufficient to transport bacteria in poultry manure on the surface of soil block to a depth of at least 32.5 cm in the silt loam soil as result of preferential flow in well-structured soil (McMurry et al., 1998). In tilled blocks, the fecal coliform concentrations took longer to elute because preferential flow paths were disrupted in the upper 12.5 cm of the soil. Rainfall on well-structured soil caused the preferential movement of fecal bacteria even in unsaturated flow conditions (McMurry et al., 1998). Hagedorn et al. (1978) observed E. coli and Streptococcus fecalis transport in eight directions from pits filled with topsoil and gravel after two heavy rains. The strong directional subsurface bacteria movement was more rapid than had been expected for 2% surface gradient. Smith et al. (1985) studied E. coli in columns filled with either undisturbed or sieved through a 20-mm screen and repacked silt loam soil at different flow rates. Disturbed cores retained at least 93% of the cells applied compared with 21 to 78% in intact cores. The authors suggested that macropore transport had contributed to the rapid bacterial movement. Natsch et al. (1996) studied bromide and a biocontrol strain of Pseudomonas fluorescens transport in structural clayey loam soil (gleyic Cambisol). They concluded that if rainfall occurred immediately after release of bacteria into field soil, macropore flow could lead to the displacement of a significant number of the applied bacteria to at least 150-cm deep. Unc and Goss (2003) studied vertical transport of coliforms from liquid swine and solid cow manure applied on the surface of silty loam and sandy loam soil in southern Ontario. They found that the velocity of bacteria transport was 35 times greater than the average pore-water velocity in soil and they attributed such transport to presence of macropores.
Manure application and animal grazing lead to application of large amounts of microorganisms on soil surfaces. Microorganisms, including human pathogens, are released as manure dissolves, and have a potential to reach water sources (Reddy et al., 1981; Harvey et al., 1989; Jamieson et al., 2002, Unc and Goss, 2003). As the microorganisms are released with manure particulates, a coupled transport of microorganisms and organic colloids occurs in soils. Studies of coupled microorganisms and manure transport in soils are scarce. Shelton et al. (2003) observed similarity in release and transport of fecal coliforms and manure particulates in stony soil.
The objective of this study was to document and compare transport of chloride ion, E. coli and manure colloids in undisturbed soil columns with well-developed structure.
| MATERIALS AND METHODS |
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Viable cell counts (colony forming unit, CFU) were determined by plating on MacConkey agar using an Autoplate 4000 (Spiral Biotech, Bethsda, MA). After overnight incubation at 44°C for 16 h, colonies were counted using a QCount (Spiral Biotech).
Bacteria Attachment to Soil
Escherichia coli attachment to the soil was studied in batch experiments with disturbed soil. The procedure of the batch experiments was similar to that of Gantzer et al. (2001). Manure was collected from the Dairy Research Unit of the USDA/ARS facility in Beltsville and stored at temperature 4°C for 2 mo prior to the experiment. Escherichia coli was not detected in manure after 2 mo. Manure had pH of 6.95 and contained of 15.8% total solids, 1210 mg L1 of total nitrogen, 306 mg L1 of ammonium nitrogen (NH+4N), <1 mg L1 of nitrate (NO3), 148 mg L1 of soluble phosphorus (P), and 303 mg L1 of total P. The manure was filtered through cheesecloth to separate suspension from plant residue and macroscopic particles. The filtered manure was added to water to obtain water-manure suspensions of 20 000 and 40 000 mg L1 liquid manure. Escherichia coli cells were added to the suspensions and to deionized water. The air-dry soil was passed through the 2-mm sieve. Water-manure suspensions were added to the air-dry soil with soil/suspension ratios of 2:1, 1:1, 1:2, 1:5, and 1:10 g cm3. The volume of the soil-manure suspension ranged from 12 to 52 cm3. The soil suspensions were stirred for 30 min, and centrifuged at 1400 x g for 3 min in 50 mL centrifuge tubes (PTD PRO, Elkay1). The above mentioned duration of stirring and centrifuging were found to be sufficient to achieve an attachment equilibrium and to allow the soil to settle in preliminary experiments (data not shown). Escherichia coli concentrations were measured in the supernatant and applied solutions in triplicate. The attached E. coli cells were calculated from the difference between the amount applied and the amount recovered in the supernatant. Temperature during the experiment was 23°C. The Freundlich isotherm equation:
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Column Transport
Three undisturbed soil cores of 7.5 cm diam. and 20-cm length were placed into perforated PVC tubes of 25-cm length. Tubes with soil cores were submerged in paraffin through the perforation to prevent the wall filtration. Soil columns were subject to capillary saturation during 48 h. Three to five pore volumes of deionized water was passed through columns. Effluent was analyzed for the background turbidity and to confirm the absence of Cl and E. coli in pore solution before the experiment. Breakthrough experiments were performed at 9 ± 1°C to minimize bacteria growth and die-off. Bacterial suspension of concentration 4.6 105 CFU mL1 E. coli and 40000 mg L1 of diluted bovine manure was prepared as described previously in the batch studies, and 164 mg L1 KCl was added to the suspension to use Cl as a conservative tracer. The electrical conductivity (EC) of the manure suspension was measured with Solomat MPM 1000 conductivity meter (Solomat Ltd., UK). The EC value of 23.1 dS m1 approximately corresponded to the value of ionic strength of 0.29 mol L1 (Griffin and Jurinak, 1973). Manure suspension was applied to the top of columns, and a layer of suspension from 4.5 to 5 cm was kept above the soil surface. Manure suspension was removed quickly from the top of columns, and deionized water was used as the influent after 500 mL of the manure suspension infiltrated into the columns. The effluent was collected from the bottom of the columns at time intervals from 15 to 30 min with a fraction collector (Retriever II, ISCO, Inc., Lincoln, NE). The effluent volume was measured in each collected sample. Chloride content was measured with a Model 94178 chloride electrode (Thermo Electron Corp., Beverly, MA) in the detection range from 1.8 to 35 500 mg L1. Turbidity was determined using a 2020 Turbidimeter (LaMotte Co., Chestertown, MD) with the Tungsten incandescent bulb as the light source. The turbidimeter was calibrated for manure content in the range from 0 to 40 000 mg L1, and values of nephelometric turbidity units (NTU) were converted into mg L1. The E. coli content was determined in 50 µL subsamples that had been plated on MacConkeys Agar using an Autoplate 4000 spiral platter manufactured by Spiral Biotech (Bethesda, MD), and had been incubated for 14 h at temperature 42°C. Escherichia coli (CFUs) were counted using a Protocol plate reader (Synoptics, Cambridge, UK).
Soil bulk density, water content, and E. coli distribution were measured in columns after the experiment in 2-cm layers of soil, 10 per each column. Columns were drained overnight at 9°C on gravel filter and disassembled at 23°C. The bulk density and the water content were determined gravimetrically in a half of the soil mass at each layer. The metal ring of 2-cm height and 4-cm diam. was used to sample soil for the bulk density and the volumetric water content measurements. The E. coli contents associated with solid and liquid phases were measured in the soil remaining after the ring sampling. A 20-g soil sample was centrifuged using perforated tubes for 5 min at 1400 x g. The 5 min time duration was experimentally found sufficient to extract soil solution. The mass of extracted solution and E. coli content were measured. The centrifuged soil was diluted with 80 mL of deionized water, and was blended during 2 min with the Waring Commercial Laboratory Blender (Model 34BL97, Torrington, CT). The soil suspension was centrifuged at 1400 x g during 3 min, and E. coli content was determined in the supernatant. Results were converted into CFU per gram of dry soil. Soil for E. coli content measurements was sampled in two replications. All solutions were plated in two replications.
The aggregate size distribution was determined in soil columns in two layers from 0 to 10 cm and from 10 to 20 cm. The air dry soil was sieved through Hubbard Screen Sieves Kit, set/6#3070-6 (Hubbard Scientific, Fort Collins, CO) into the following aggregate diameter groups: <0.063, 0.063 to 0.125, 0.125 to 0.25, 0.25 to 0.5, 0.5 to 1, 1 to 2, and 2 to 4 mm. Hundred-gram soil samples were placed on the top of the set of sieves and were shaken manually during 5 min. Aggregate mass at each sieve was converted to the percentage of this aggregate fraction in total mass.
| RESULTS |
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Vertical distributions of volumetric water contents in columns after the experiment are shown in Fig. 5a . Water content was 1.5 to 2 times higher in top 2-cm layer than average values below this layer where no dependence on depth was observed. The smallest variability in water content (0.451 ± 0.026 cm3 cm3) was obtained below the depth of 2 cm in column 2. Water content variability in columns 1 and 3 was identical, but average value in the column 1 (0.372 ± 0.063 cm3 cm3) was less than in the column 3 (0.425 ± 0.076 cm3 cm3).
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Profile distributions of viable E. coli are shown in Fig. 6 . Maximum total content of E. coli was observed at the top of the slow column 1 and in the middle of the profile in fast columns 2 and 3. Profile distributions of E. coli in pore solution resembled the water content distributions below 0- to 2-cm layer in all columns. The determination coefficient of the linear regression of average water contents vs. the average bacteria contents in the liquid phase was R2 = 0.48. The total bacteria contents in soils were similar to the contents associated with the solid phase. Table 2 shows E. coli fractions left in soil and found in the effluent. More bacteria were found in soil of the slow column 1. The ratio of bacteria content in pore solution to the attached bacteria amount decreased as the velocity increased.
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| DISCUSSION |
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An increase in manure concentrations reduced bacteria attachment to soil (Fig. 1). The decrease in bacteria attachment could be caused by (i) modification of soil mineral surfaces by soluble manure organic and inorganic constituents; (ii) competition of dissolved organic matter and bacteria for adsorption sites; (iii) modification of bacteria surfaces by the dissolved organic matter. Some of those mechanisms have been observed in groundwater and sediment studies. Scholl and Harley (1992) observed an increase in bacteria adsorption after the removal of dissolved organic C from the bacterial suspension used in the adsorption experiment. The authors explained their results by competition between dissolved organic C and bacteria for positively charged surface sites on the sand. Johnson and Logan (1996) studied the effect of dissolved organic matter on Savannah River strain A1264 adsorption on quartz and iron (Fe)-quartz particles. They concluded that organic matter enhanced bacterial transport by increasing the negative surface charge of quartz and bacteria and made the bacteria-quartz interaction electrostatically unfavorable. It remains to be seen which mechanisms prevail in the effect of manure in solution on bacteria attachment to soils.
Column Transport
All BTCs had long tails in this study (Fig. 2 and 3). Tailing in BTC was observed in column studies of reactive solute transport and was attributed to (i) the adsorption kinetics and (ii) differences in mobility of water in different parts of pore space. Kinetics of straining was also suggested as a mechanism causing BTC tailing in bacteria and colloid transport. The effect of all these mechanisms has been observed in column studies of bacteria transport in sand. Hendry et al. (1997) observed well-defined tails on BTCs of K. oxytoca percolated through water-saturated silica sand. The tailing was explained by both an irreversible and kinetically controlled reversible sorption. The estimated rate constant of the bacteria attachment was five times greater than the estimated detachment rate in their study. Later, Hendry et al. (1999) concluded that differences between the breakthrough concentrations of the bacteria and the conservative Cl tracer could be attributed to sorption. Fontes et al. (1991) created zones with different permeability in sandy columns and observed BTC tailing both for Cl and for bacteria due to the differences in mobility of water in different parts of the pore space. Wollum and Cassel (1978) observed considerable tailing in breakthrough curves of Streptomycetes spp. in sand columns. Anion BTCs did not have tails in the same study, and the authors hypothesized that microorganisms, unlike anions, might be trapped in small pores and a fraction of them subsequently released over time into water flowing through the porous medium.
The kinetics of bacteria and manure attachment-detachment should have a role in the BTC tailing in this work. Bacteria retention in soil columns was greater in column 1 with low flow velocity, than in columns 2 and 3 with high velocity (Fig. 7). That can be explained by substantially larger time that bacteria have had to attach to surfaces. Leached amounts of E. coli were greater than leached amounts of the conservative tracer Cl in columns 2 and 3 (Fig. 4a). This indicated that after half pore volume had been leached attachment-detachment equilibrium was not approached at high flow velocity. Much more time was available for the attachment to bacteria in column 1, and the relative mass of leached bacteria in this column was much smaller than that of chloride. Bacteria detachment also could be enhanced at high flow velocities. More E.coli was released from columns with high velocity after the pulse of manure and bacteria suspension passed through the soil. Attached bacteria can start to move with water flow when the external forces overcome the attractive ones. The differences in mobility of pore solution could also be a factor of tailing. When a part of pore water is relatively immobile compared to another part, a nonreactive tracer is transported mostly in mobile water, and slowly diffuses to and from immobile water. The BTCs are strongly skewed for such transport conditions. The Cl tracer in this work had a symmetrical BTC in the column with low flow velocity and skewed BTCs in columns with fast flow (Fig. 2). Therefore, substantial differences in mobility of different parts of soil water existed in columns with fast flow and could be partly responsible for the tailing on E. coli and manure BTC.
The cumulative breakthrough of E. coli and manure particulates was larger in fast columns compared with the slow column (Fig. 3). Such transport enhancement has been observed in experiments with pure culture bacteria transport in sand and disturbed soil columns (Wollum and Cassel, 1978; Smith et al., 1985; Tan et al., 1994; Banks et al., 2003) when columns were made as similar as possible, and the differences in velocities were imposed. The differences in flow velocities among the columns in this work reflected natural field soil variability. Soil porosity in column 1 with low velocity was smaller (0.420 cm3 cm3) than in columns 2 and 3 (0.433 cm3 cm3 and 0.445 cm3 cm3). Our hypothesis is that the differences in velocities are related to differences in soil structure, larger velocity corresponded to greater macroporosity. Soil was well structured in this study (Table 1) and the presence of macroporosity should be expected. The role of macroporosity on bacterial transport in soil has been repeatedly discussed. Bitton et al. (1974) observed bacterial concentration peaks of the BTC earlier than the influent replaced one pore volume in a sandy soil column. They concluded that the mobile phase, which transported the bacteria, was smaller than the water content of the column. Wollum and Cassel (1978) concluded that bacteria transport occur primarily through the interconnected large pores.
Unlike results reported in the previous work of Shelton et al. (2003), breakthrough of bacteria and manure was not similar (Fig. 3 and 4). At early stages of the breakthrough, a substantial amount of bacteria moved faster than manure in fast columns. At the late stages of breakthrough, relative concentrations of manure colloids stabilized at low levels that were sufficient to provide a continuous growth of cumulative leached manure up to 27 pore volumes. One reason for that could be a graduate dissolution of initially relatively large manure particulates that became strained in columns. Bacteria concentrations have also stabilized at low levels in late effluent portions. However, those levels were so low that they did not affect the cumulative breakthrough (Fig. 3). At least at late stages of the transport, manure particulates either did not serve as a carrier of bacteria, or transported bacteria in small amounts.
Profile distributions of viable E. coli in fast-flow columns did not show a significant trend of decrease with depth (Fig. 6). Large amounts of infiltrated water could not leach bacteria from the columns. Bacteria could probably enter parts of pore space that sheltered them and the low temperature in the experiment slowed down predation and prevented the die-off. Unlike the fast columns, the slow column had a peak of bacteria concentrations in the layer of loose soil at the top of the column. We hypothesized that manure particulates could settle in this layer and serve as an abode and a food source for E. coli. Manure accumulation on the surface of the slow column was visible, and data in Table 1 show a substantial difference in organic C content between column 1 and columns 2 and 3. Escherichia coli distributions below the loose top layer bore similarity with water content distributions. Higher water contents corresponded to higher bacteria contents, that is, in the middle part of the column 3; the lowest water contents in the bottom of the columns 1 and 3 corresponded to the lowest bacteria concentrations in the profiles. In water-saturated columns 2 and 3, higher and lower water contents corresponded to looser and denser soil layers, respectively (Fig. 5). Looser soil layers might have a relatively large stagnant fraction of pore water where bacteria could be retarded.
Relationships between bacteria associated with the solid and liquid phase in Fig. 7 resembled the attachment isotherms in Fig. 1. Columns were disassembled during one day at the same temperature as the attachment isotherms were measured, and there was some time to approach attachment-detachment equilibria. The isotherms in Fig. 1 show that the lower the manure concentration the stronger the attachment. Based on the cumulative breakthrough, we assumed that manure content in the pore solution was less in column 1 (Fig. 3), and that caused the increase in bacteria attachment to soil particles compared with the other two columns. The data on equilibriums in columns after experiments indicate that there were no substantial differences in attachment among the columns. This underscores the importance of the velocity rather than attachment on the observed differences in column transport.
This study demonstrates that spatial variability in soil structure, resulting in large variations of pore water velocity, can cause substantial differences in transport of manure particulates and bacteria. Macroporosity appears to be responsible for the fast breakthrough of a relatively large fraction of applied bacteria and for tailing in breakthrough curves. The soil matrix serves as a straining and adsorbing media having relatively larger effect on the transport when the water flow is slow.
| CONCLUSIONS |
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| ACKNOWLEDGMENTS |
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| REFERENCES |
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